Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015936419.1_cds_XP_016482018.1_73289
CDS Infomation

[gene=LOC107802948] [db_xref=GeneID:107802948] [protein=zinc finger BED domain-containing protein RICESLEEPER 1-like] [protein_id=XP_016482018.1] [location=complement(join(28615..28710,28780..28923,31576..31604,31698..31911,32106..33077))] [gbkey=CDS]
Sequence

ATGGCAAATGGTATTGGTAGGTGCTTACGTGAGTGGGGGATAAATAAGATCTTCACTGTC
ACAGTTGATAAAGCAAGCTCCAATGATGTGACAGTAAAAGAATTGTCTAAGCAATTAACA
AAAATGGGAACTAATTTGATGAACGGTAATCACCTTCACGTGAGATGTATGGCTCACATC
ATGAATCTTGTGGTCCAGGATGGTTTAAAAGAATCTTCAGTGTCTATTGAACGTGTTAGG
CATGCAGTGAGATATGTTAGGCAGTCTCCTGCGAGGTTAAAGAGGTTTCAAGAATGTTTT
GATAATGAACAACTCAATTGTAAAAAAACTTTATGCTTGGATATTCCAACTAGGTGGAAT
TTCACCTACTTGATGTTGCGCAGGGATGTTGAATTTGAAGGTGCATTTTCACATTATGCA
TCTAGTGAAATTGGCCTAAGACATTATCTTGAGCATTCTTATATTGAAGATGGAATTCCT
ACAGGTGAACTTTTGAGTAGTGATTGGGAGAATGTAAAAAGAATTACAAAGTTTCTTGAA
ATCTTCTATCTTCTTACTTTGAAAATATCTGGATTACGTTATGTTACATCGAATATTCAT
TTTCTTGAAATTTGGGCGGTTGCTGTTTATTTGAAGCAATTGATAGCAAATGAAGATACA
GTTTTAAGTGAAATGGCAAAGAAGATGAAGGAAAAGTTTAATACGTATTGGGGTGATCCA
GGAAAAATGAACAAGATAATTTTCATCTCATGTATTTTGGATCCACGTTACAAGCTCGAA
TCAGTTGGTTATGCACTTGTAAAGATGTTTGGTAAAGATCCGGGGGAAACTATACAAGCA
GAAGTGAAGAAGTACATGACTTCATTATTTTGTGAGTATGTAAAGAAGTCCAGCTCAAAA
GGTATCGTGCTTGCTTCATCTTCAGATTATTCTTCATTGGACACTTCTACTTCCGGGCTT
TCTGACAGTCAAATGGCTCGTGATGTATTAGCGGTTCCGGTTTCAAGCGTGGCATCCGAA
TATGCGTTTAGTACGGGAGAGCGCCTTCTTGATTCATTTAGGAGTTCATTAACTCCTAAA
TTGGTGCAAGCTCTAGTGTGTCTTCAAGATTGGCTTCGAAATGAAAAATTAAAACAACCT
GTTAGTGTTGAGGAAGATATTGATAAAATCGAGCAACTTGAACAAGATTTAGCCAGCGAT
GGAAAAGACCCTTCCCGGCAGGTGCGATCCTCGCAGATGCGAGTTTTGTTCGCAGAAGCG
GAGAGGGAAGGGGAGGCCATCGACCGCGGATGCGGAATTTTGGCTCACCTGCGAACGCGC
AAGTGTGAGGCAGCGCACGCAGATGCGAAGTTGGTCCAGATGCGACCCCTGTCCTTCTCC
TTTGTTTCTAAACTAGCAGAGCTTTTTCCTACTAATGAGTACAGATATGCGGCCGTTAAA
ACGGACGAAGCTTAG

Peptide Sequence

PEP ID

XP_016482018.1
PEP Infomation

PREDICTED: zinc finger BED domain-containing protein RICESLEEPER 1-like [Nicotiana tabacum]
Sequence

MANGIGRCLREWGINKIFTVTVDKASSNDVTVKELSKQLTKMGTNLMNGNHLHVRCMAHI
MNLVVQDGLKESSVSIERVRHAVRYVRQSPARLKRFQECFDNEQLNCKKTLCLDIPTRWN
FTYLMLRRDVEFEGAFSHYASSEIGLRHYLEHSYIEDGIPTGELLSSDWENVKRITKFLE
IFYLLTLKISGLRYVTSNIHFLEIWAVAVYLKQLIANEDTVLSEMAKKMKEKFNTYWGDP
GKMNKIIFISCILDPRYKLESVGYALVKMFGKDPGETIQAEVKKYMTSLFCEYVKKSSSK
GIVLASSSDYSSLDTSTSGLSDSQMARDVLAVPVSSVASEYAFSTGERLLDSFRSSLTPK
LVQALVCLQDWLRNEKLKQPVSVEEDIDKIEQLEQDLASDGKDPSRQVRSSQMRVLFAEA
EREGEAIDRGCGILAHLRTRKCEAAHADAKLVQMRPLSFSFVSKLAELFPTNEYRYAAVK
TDEA

Transcript Sequence

Gene sequence data has not been registered.